MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,736
rRNA: 15
tRNA: 60
tmRNA: 1
Total number of protein coding genes annotated/found:
2,715
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 136 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5041|JADGLJ010000001.1
MBF0812078.1
Genome Viewer
NA
AA
1065/355
1613-549
P-loop NTPase
SEQF5041|JADGLJ010000001.1
MBF0812079.1
Genome Viewer
NA
AA
459/153
2314-1856
SepA family multidrug efflux transporter
SEQF5041|JADGLJ010000001.1
MBF0812080.1
Genome Viewer
NA
AA
1341/447
3812-2472
MFS transporter
SEQF5041|JADGLJ010000001.1
MBF0812081.1
Genome Viewer
NA
AA
684/228
4861-4178
hemolysin III family protein
SEQF5041|JADGLJ010000001.1
MBF0812082.1
Genome Viewer
NA
AA
1188/396
6066-4879
UTP--glucose-1-phosphate uridylyltransferase
SEQF5041|JADGLJ010000001.1
MBF0812083.1
Genome Viewer
NA
AA
504/168
6685-6182
metal-dependent hydrolase
SEQF5041|JADGLJ010000001.1
MBF0812084.1
Genome Viewer
NA
AA
261/87
6861-7121
hypothetical protein
SEQF5041|JADGLJ010000001.1
MBF0812085.1
Genome Viewer
NA
AA
1326/442
9274-7949
APC family permease
SEQF5041|JADGLJ010000001.1
MBF0812086.1
Genome Viewer
NA
AA
807/269
10082-9276
carbon-nitrogen hydrolase family protein
SEQF5041|JADGLJ010000001.1
MBF0812087.1
Genome Viewer
NA
AA
318/106
10352-10669
heme oxygenase
SEQF5041|JADGLJ010000001.1
MBF0812088.1
Genome Viewer
NA
AA
1320/440
12135-10816
YjiH family protein
SEQF5041|JADGLJ010000001.1
MBF0812089.1
Genome Viewer
NA
AA
963/321
13349-12387
iron chelate uptake ABC transporter family permease subunit
SEQF5041|JADGLJ010000001.1
MBF0812090.1
Genome Viewer
NA
AA
1035/345
14380-13346
iron ABC transporter permease
SEQF5041|JADGLJ010000001.1
MBF0812091.1
Genome Viewer
NA
AA
1011/337
15402-14392
ABC transporter substrate-binding protein
SEQF5041|JADGLJ010000001.1
MBF0812092.1
Genome Viewer
NA
AA
1062/354
16559-15498
alanine/ornithine racemase family PLP-dependent enzyme
SEQF5041|JADGLJ010000001.1
MBF0812093.1
Genome Viewer
NA
AA
1758/586
18320-16563
siderophore synthetase
SEQF5041|JADGLJ010000001.1
MBF0812094.1
Genome Viewer
NA
AA
1179/393
19495-18317
MFS transporter
SEQF5041|JADGLJ010000001.1
MBF0812095.1
Genome Viewer
NA
AA
1962/654
19599-21560
sialic acid synthase
SEQF5041|JADGLJ010000001.1
MBF0812096.1
Genome Viewer
NA
AA
501/167
22433-21933
Asp23/Gls24 family envelope stress response protein
SEQF5041|JADGLJ010000001.1
MBF0812097.1
Genome Viewer
NA
AA
240/80
22746-22507
DUF2273 domain-containing protein
Items 1 - 20
🡆
click arrow to navigate by page or
of 136 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
